Publications

2023

  • “Exclusion of m6A from splice-site proximal regions by the exon junction complex dictates m6A topologies and mRNA stability.”
    Uzonyi A, Dierks D, Nir R, Kwon OS, Toth U, Barbosa I, Burel C, Brandis A, Rossmanith W, Le Hir H, Slobodin B, Schwartz S.
    Molecular Cell; PMID: 36599352

2022

  • “Cap-independent translation and a precisely located RNA sequence enable SARS-CoV-2 to control host translation and escape anti-viral response.”
    Slobodin B, Sehrawat U, Lev A, Hayat D, Zuckerman B, Fraticelli D, Ogran A, Ben-Shmuel A, Bar-David E, Levy H, Ulitsky I, Dikstein R.
    Nucleic Acids Research; PMID: 35849342

2021

  • “SARS-CoV-2 uses a multipronged strategy to impede host protein synthesis.”
    Finkel Y, Gluck A, Winkler R, Nachshon A, Mizrahi O, Lubelsky Y, Slobodin B, Yahalom-Ronen Y, Ulitsky I, Israely T, Paran N, Schwartz M, and Stern-Ginossar N.
    Nature; PMID: 33979833.

2020

  • “Transcription dynamics regulate poly(A) tails and expression of the RNA degradation machinery to balance mRNA levels. “
    Slobodin B, Bahat A, Sehrawat U, Becker-Herman S, Zuckerman B, Weiss AN, Han R, Elkon R, Agami R, Ulitsky I, Shachar I, and Dikstein R.
    Molecular Cell; PMID: 32294471.
  • “So close, no matter how far: multiple paths connecting transcription to mRNA translation in eukaryotes. “
    Slobodin B, Dikstein R.
    EMBO Reports; PMID: 32803873.
  • “Epigenetics of the aging musculoskeletal system.”
    Slobodin B. Chapter in the “Rheumatic disease in geriatrics”.
    Publisher: Springer Cham,17-28.

2017

  • “Transcription Impacts the Efficiency of mRNA Translation via Co-transcriptional N6-adenosine Methylation. “
    Slobodin B, Han R, Calderone V, Vrielink JA, Loayza-Puch F, Elkon R, Agami R.
    Cell    ; PMID:28388414.
  • “The methylated way to translation. “
    Han R, Slobodin B, Agami R.
    Oncotarget; PMID: 29212149.

2016

  • “An essential role for COPI in mRNA localization to mitochondria and mitochondrial function. “
    Zabezhinsky D, Slobodin B, Rapaport D, Gerst JE.
    Cell Reports; PMID: 27068463.
  • A response to “MS2 coat protein bound to yeast mRNAs block 5’ to 3’ degradation and trap mRNA decay products: implications for the localization of mRNAs by MS2-MCP system”.
    Haimovich G, Zabezhinsky D, Haas B, Slobodin B, Purushothaman P, Fan L, Levin JZ, Regev A, Nusbaum C, and Gerst JE
    RNA; PMID: 26968626.

 

2015

  • “Production of bone formation-regulating factors by osteoclasts in vitro does not correlate with the radiographic disease progression in patients with ankylosing spondylitis.”
    Slobodin G, Slobodin B, Rimar D, Peri R, Kessel A, Toubi E, Rosner I, Odeh M.
    Joint Bone Spine; PMID: 26453099.
  • “Transcription initiation determines its end. “
    Slobodin B, Agami R.
    Molecular Cell; PMID: 25616066.

2013

  • “Translation- and SRP-independent mRNA targeting to the endoplasmic reticulum in the yeast Saccharomyces cerevisiae. “
    Kraut-Cohen J, Afanasieva E, Haim-Vilmovsky L, Slobodin B, Yosef I, Bibi E, Gerst JE.
    Mol Biol Cell; PMID: 23904265.

2011

  • “RaPID: an aptamer-based mRNA affinity purification technique for the identification of RNA and protein factors present in ribonucleoprotein complexes.”
    Slobodin B, Gerst JE.
    Methods Mol Biol; PMID: 21431754.

2010

  • “A novel mRNA affinity purification technique for the identification of interacting proteins and transcripts in ribonucleoprotein complexes.”
    Slobodin B, Gerst JE.
  • RNA; PMID: 20876833.

2007

  • “Role of PP2Calpha in cell growth, in radio- and chemosensitivity, and in tumorigenicity. “
    Lammers T, Peschke P, Ehemann V, Debus J, Slobodin B, Lavi S, Huber P.
    Mol Cancer; PMID: 17941990.